POP-OUT | CLOSE
 
The 2.3 Angstrom resolution crystal structure of the heterodimer of the human PPARgamma and RXRalpha ligand binding domains respectively bound with GW409544 and 9-cis retinoic acid and co-activator peptides.
Sequence Clustering and Redundancy Reduction Results
1K74
Sequence Clusters for the Sequence Entities in PDB 1K74
Entity #1: Chains: A - Retinoic acid receptor RXR-alpha protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 31 44 254
95% 32 47 336
90% 32 47 355
70% 33 56 255
50% 33 56 297
40% 37 69 263
30% 411 618 12
Entity #2: Chains: D - Peroxisome proliferator activated receptor gamma protein, length: 283 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 73 119 41
95% 78 125 67
90% 78 125 71
70% 78 125 85
50% 98 162 76
40% 98 162 97
30% 412 618 12
Entity #3: Chains: B,E - steroid receptor coactivator protein, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 10 14 1071
95% 10 14 1477
90% 10 14 1525
70% 10 14 1556
50% 10 14 1629
40% 10 14 1665
30% 10 14 1614
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.