POP-OUT | CLOSE

An Information Portal to 109822 Biological Macromolecular Structures

The 2.3 Angstrom resolution crystal structure of the heterodimer of the human PPARgamma and RXRalpha ligand binding domains respectively bound with GW409544 and 9-cis retinoic acid and co-activator peptides.
Sequence Clustering and Redundancy Reduction Results
1K74
Sequence Clusters for the Sequence Entities in PDB 1K74
Entity #1: Chains: A - Retinoic acid receptor RXR-alpha protein, length: 238 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 32 45 260
95% 33 48 355
90% 33 48 377
70% 34 57 298
50% 34 57 328
40% 38 70 285
30% 440 656 12
Entity #2: Chains: D - Peroxisome proliferator activated receptor gamma protein, length: 283 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 78 127 59
95% 84 134 80
90% 84 134 84
70% 84 134 104
50% 105 172 100
40% 105 172 122
30% 441 656 12
Entity #3: Chains: B,E - steroid receptor coactivator protein, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 10 14 1234
95% 10 14 1669
90% 10 14 1713
70% 10 14 1735
50% 10 14 1777
40% 10 14 1805
30% 10 14 1722
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.