Sequence Similarity Clusters for the Entities in PDB 1K6Y

Entity #1 | Chains: A,B,C,D
Integrase protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20862
95 % 1 1 18125 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 1 1 17671
70 % 1 1 16349
50 % 1 2 2082
40 % 1 2 2074
30 % 1 2 2001

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.