Sequence Similarity Clusters for the Entities in PDB 1K6L

Entity #1 | Chains: L
PHOTOSYNTHETIC REACTION CENTER L SUBUNIT protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 68 434
95 % 80 97 349
90 % 80 97 374
70 % 80 97 410
50 % 100 129 350
40 % 100 129 376
30 % 100 129 376
Entity #2 | Chains: M
PHOTOSYNTHETIC REACTION CENTER M SUBUNIT protein, length: 314 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 53 62 485
95 % 80 97 348
90 % 80 97 373
70 % 80 97 408
50 % 100 129 349
40 % 100 129 375
30 % 100 129 375
Entity #3 | Chains: H
PHOTOSYNTHETIC REACTION CENTER H SUBUNIT protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 79 96 255
95 % 80 97 350
90 % 80 97 375
70 % 80 97 411
50 % 80 97 489
40 % 100 129 377
30 % 100 129 377

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.