Sequence Similarity Clusters for the Entities in PDB 1K5N

Entity #1 | Chains: A
major histocompatibility complex molecule HLA-B*2709 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 5370
95 % 1 34 1416
90 % 1 189 144
70 % 1 666 7
50 % 1 671 7
40 % 1 721 10
30 % 1 838 15
Entity #2 | Chains: B
beta-2-microglobulin, light chain protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 579 2
95 % 1 622 3
90 % 1 631 4
70 % 1 859 5
50 % 1 881 5
40 % 1 881 9
30 % 1 881 14
Entity #3 | Chains: C
nonameric model peptide m9 protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.