Sequence Similarity Clusters for the Entities in PDB 1K5N

Entity #1 | Chains: A
major histocompatibility complex molecule HLA-B*2709 protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 5773
95 % 1 34 1524
90 % 1 201 135
70 % 1 727 6
50 % 1 732 6
40 % 1 783 10
30 % 1 907 15
Entity #2 | Chains: B
beta-2-microglobulin, light chain protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 624 2
95 % 1 668 3
90 % 1 677 4
70 % 1 922 4
50 % 1 944 3
40 % 1 944 7
30 % 1 944 12
Entity #3 | Chains: C
nonameric model peptide m9 protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures