Sequence Similarity Clusters for the Entities in PDB 1K5J

Entity #1 | Chains: A,B,C,D,E
Nucleoplasmin Core protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 15894
95 % 1 1 14884 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.3
PDBFlex
90 % 3 3 4535
70 % 3 3 4458
50 % 3 3 4284
40 % 3 3 4095
30 % 3 3 3773

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.