Sequence Similarity Clusters for the Entities in PDB 1K5G

Entity #1 | Chains: A,D,G,J
GTP-binding nuclear protein RAN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 48 51 489
95 % 68 74 309
90 % 71 78 309
70 % 73 81 342
50 % 73 81 400
40 % 74 82 417
30 % 690 772 16
Entity #2 | Chains: B,E,H,K
Ran-specific GTPase-activating protein protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 9059
95 % 2 2 9256
90 % 2 2 9162
70 % 2 2 8769
50 % 2 2 7938
40 % 2 2 7285
30 % 2 2 6424
Entity #3 | Chains: C,F,I,L
Ran GTPase activating protein 1 protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 4609
95 % 4 4 5371
90 % 4 4 5382
70 % 4 4 5329
50 % 4 4 5062
40 % 4 4 4777
30 % 4 4 4354

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.