Sequence Similarity Clusters for the Entities in PDB 1K5G

Entity #1 | Chains: A,D,G,J
GTP-binding nuclear protein RAN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 48 51 450
95 % 68 74 290
90 % 70 77 293
70 % 72 80 319
50 % 72 80 374
40 % 73 81 394
30 % 665 742 17
Entity #2 | Chains: B,E,H,K
Ran-specific GTPase-activating protein protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 8630
95 % 2 2 8809
90 % 2 2 8718
70 % 2 2 8334
50 % 2 2 7572
40 % 2 2 6957
30 % 2 2 6135
Entity #3 | Chains: C,F,I,L
Ran GTPase activating protein 1 protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 4377
95 % 4 4 5107
90 % 4 4 5126
70 % 4 4 5063
50 % 4 4 4828
40 % 4 4 4578
30 % 4 4 4165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.