Sequence Similarity Clusters for the Entities in PDB 1K5G

Entity #1 | Chains: A,D,G,J
GTP-binding nuclear protein RAN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 40 576
95 % 57 63 312
90 % 59 66 323
70 % 61 69 342
50 % 61 69 403
40 % 62 70 423
30 % 650 727 15
Entity #2 | Chains: B,E,H,K
Ran-specific GTPase-activating protein protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 8477
95 % 2 2 8662
90 % 2 2 8579
70 % 2 2 8211
50 % 2 2 7456
40 % 2 2 6856
30 % 2 2 6046
Entity #3 | Chains: C,F,I,L
Ran GTPase activating protein 1 protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 4282
95 % 4 4 4996
90 % 4 4 5020
70 % 4 4 4965
50 % 4 4 4736
40 % 4 4 4501
30 % 4 4 4105

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.