Sequence Similarity Clusters for the Entities in PDB 1K5G

Entity #1 | Chains: A,D,G,J
GTP-binding nuclear protein RAN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 48 51 460
95 % 68 74 294
90 % 70 77 298
70 % 72 80 322
50 % 72 80 380
40 % 73 81 402
30 % 672 749 16
Entity #2 | Chains: B,E,H,K
Ran-specific GTPase-activating protein protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 8761
95 % 2 2 8949
90 % 2 2 8852
70 % 2 2 8467
50 % 2 2 7681
40 % 2 2 7049
30 % 2 2 6207
Entity #3 | Chains: C,F,I,L
Ran GTPase activating protein 1 protein, length: 386 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 4434
95 % 4 4 5181
90 % 4 4 5197
70 % 4 4 5129
50 % 4 4 4887
40 % 4 4 4632
30 % 4 4 4214

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.