Sequence Similarity Clusters for the Entities in PDB 1K5C

Entity #1 | Chains: A
ENDOPOLYGALACTURONASE protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26813
95 % 1 3 22540 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 3 21883
70 % 1 3 20088
50 % 1 3 17419
40 % 1 9 2779
30 % 1 10 2503

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures