Sequence Similarity Clusters for the Entities in PDB 1K55

Entity #1 | Chains: A,B
Beta lactamase OXA-10 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 31 597
95 % 3 45 447 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 3 45 488
70 % 3 45 522
50 % 3 107 150
40 % 10 151 136
30 % 11 168 135
Entity #2 | Chains: C,D
Beta lactamase OXA-10 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 31 597
95 % 4 45 447 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 4 45 488
70 % 4 45 522
50 % 4 107 150
40 % 11 151 136
30 % 12 168 135

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures