Sequence Similarity Clusters for the Entities in PDB 1K54

Entity #1 | Chains: A,B
Beta lactamase OXA-10 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 26 625
95 % 14 45 369 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 14 45 397
70 % 14 45 435
50 % 16 69 276
40 % 25 108 209
30 % 31 127 199
Entity #2 | Chains: C,D
Beta lactamase OXA-10 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 26 625
95 % 15 45 369 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 15 45 397
70 % 15 45 435
50 % 17 69 276
40 % 26 108 209
30 % 32 127 199

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.