Sequence Similarity Clusters for the Entities in PDB 1K54

Entity #1 | Chains: A,B
Beta lactamase OXA-10 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 31 594
95 % 14 45 445 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 14 45 485
70 % 14 45 517
50 % 17 107 146
40 % 28 151 135
30 % 32 168 136
Entity #2 | Chains: C,D
Beta lactamase OXA-10 protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 31 594
95 % 15 45 445 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.9
PDBFlex
90 % 15 45 485
70 % 15 45 517
50 % 18 107 146
40 % 29 151 135
30 % 33 168 136

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures