Sequence Similarity Clusters for the Entities in PDB 1K4U

Entity #1 | Chains: S
PHAGOCYTE NADPH OXIDASE SUBUNIT P67PHOX protein, length: 62 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74878
95 % 1 1 51896
90 % 1 1 49183
70 % 1 1 43092
50 % 1 1 36711
40 % 3 3 11536
30 % 1013 1062 9
Entity #2 | Chains: P
PHAGOCYTE NADPH OXIDASE SUBUNIT P47PHOX protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76584
95 % 1 1 53311
90 % 1 1 50516
70 % 1 1 44189
50 % 1 1 37665
40 % 1 1 33192
30 % 1 1 28131

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures