Sequence Similarity Clusters for the Entities in PDB 1K4J

Entity #1 | Chains: A
acyl-homoserinelactone synthase EsaI protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 32473
95 % 2 2 32533 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 2 31164
70 % 2 2 27890
50 % 2 2 23865
40 % 2 2 21007
30 % 2 2 17525

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures