Sequence Similarity Clusters for the Entities in PDB 1K4D

Entity #1 | Chains: A
antibody Fab fragment heavy chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 53 613
95 % 10 53 866
90 % 10 53 902
70 % 907 2016 1
50 % 1869 4166 1
40 % 1869 4167 1
30 % 2089 4915 1
Entity #2 | Chains: B
antibody Fab fragment light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 53 614
95 % 10 54 851
90 % 15 65 655
70 % 760 1710 2
50 % 1870 4166 1
40 % 1870 4167 1
30 % 2090 4915 1
Entity #3 | Chains: C
potassium channel KcsA protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 15 2649
95 % 10 55 577
90 % 10 55 616
70 % 10 56 582
50 % 10 58 580
40 % 10 58 612
30 % 10 58 623

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.