Sequence Similarity Clusters for the Entities in PDB 1K4C

Entity #1 | Chains: A
antibody Fab fragment heavy chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 53 624
95 % 5 53 881
90 % 5 53 916
70 % 561 2041 1
50 % 1168 4220 1
40 % 1168 4221 1
30 % 1284 4972 1
Entity #2 | Chains: B
antibody Fab fragment light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 53 625
95 % 5 54 865
90 % 8 65 672
70 % 467 1729 2
50 % 1169 4220 1
40 % 1169 4221 1
30 % 1285 4972 1
Entity #3 | Chains: C
potassium channel KcsA protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 15 2685
95 % 5 55 606
90 % 5 55 633
70 % 5 56 618
50 % 5 58 590
40 % 5 58 621
30 % 5 58 628

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.