Sequence Similarity Clusters for the Entities in PDB 1K4C

Entity #1 | Chains: A
antibody Fab fragment heavy chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 46 657
95 % 5 46 930
90 % 5 46 960
70 % 489 1790 1
50 % 1008 3692 1
40 % 1009 3693 1
30 % 1107 4355 1
Entity #2 | Chains: B
antibody Fab fragment light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 46 658
95 % 5 47 904
90 % 8 57 668
70 % 405 1526 3
50 % 1009 3692 1
40 % 1010 3693 1
30 % 1108 4355 1
Entity #3 | Chains: C
potassium channel KcsA protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 15 2387
95 % 5 48 567
90 % 5 48 598
70 % 5 49 603
50 % 5 51 575
40 % 5 51 623
30 % 5 51 620

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.