POP-OUT | CLOSE
 
Potassium Channel KcsA-Fab complex in high concentration of K+
Sequence Clustering and Redundancy Reduction Results
1K4C
Sequence Clusters for the Sequence Entities in PDB 1K4C
Entity #1: Chains: A - antibody Fab fragment heavy chain protein, length: 219 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 46 511
95% 5 46 753
90% 5 46 776
70% 407 1480 2
50% 840 3070 1
40% 841 3071 1
30% 919 3629 1
Entity #2: Chains: B - antibody Fab fragment light chain protein, length: 212 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 46 512
95% 5 47 730
90% 8 53 635
70% 341 1291 3
50% 841 3070 1
40% 842 3071 1
30% 920 3629 1
Entity #3: Chains: C - potassium channel KcsA protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 15 1991
95% 5 48 503
90% 5 48 526
70% 5 49 519
50% 5 51 483
40% 5 51 514
30% 5 51 521
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.