Sequence Similarity Clusters for the Entities in PDB 1K47

Entity #1 | Chains: A,B,C,D,E,F
phosphomevalonate kinase protein, length: 337 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 11872
95 % 2 2 11474 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 2 2 11314
70 % 2 2 10686
50 % 2 2 9613
40 % 2 2 8709
30 % 3 3 5067

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures