Sequence Similarity Clusters for the Entities in PDB 1K46

Entity #1 | Chains: A
PROTEIN-TYROSINE PHOSPHATASE YOPH protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 43930
95 % 2 3 23374 Flexibility: High
Max RMSD: 11.2, Avg RMSD: 11.2
PDBFlex
90 % 2 3 22618
70 % 2 3 20678
50 % 2 3 17936
40 % 2 3 15988
30 % 2 3 13674

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.