Sequence Similarity Clusters for the Entities in PDB 1K46

Entity #1 | Chains: A
PROTEIN-TYROSINE PHOSPHATASE YOPH protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45552
95 % 2 3 24319 Flexibility: High
Max RMSD: 11.2, Avg RMSD: 11.2
PDBFlex
90 % 2 3 23512
70 % 2 3 21404
50 % 2 3 18526
40 % 2 3 16500
30 % 2 3 14116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures