Sequence Similarity Clusters for the Entities in PDB 1K46

Entity #1 | Chains: A
PROTEIN-TYROSINE PHOSPHATASE YOPH protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46487
95 % 2 3 24813 Flexibility: High
Max RMSD: 11.2, Avg RMSD: 11.2
PDBFlex
90 % 2 3 23975
70 % 2 3 21803
50 % 2 3 18843
40 % 2 3 16774
30 % 2 3 14341

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures