Sequence Similarity Clusters for the Entities in PDB 1K3V

Entity #1 | Chains: A
capsid protein VP2 protein, length: 579 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52460
95 % 1 1 38863
90 % 1 1 37087
70 % 1 1 32990
50 % 12 20 494
40 % 12 20 535
30 % 12 23 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures