Sequence Similarity Clusters for the Entities in PDB 1K3V

Entity #1 | Chains: A
capsid protein VP2 protein, length: 579 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51791
95 % 1 1 38388
90 % 1 1 36649
70 % 1 1 32614
50 % 12 20 486
40 % 12 20 530
30 % 12 23 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures