Sequence Similarity Clusters for the Entities in PDB 1K3U

Entity #1 | Chains: A
Tryptophan Synthase Alpha Chain protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 48 779
95 % 18 61 809 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 18 61 846
70 % 18 65 768
50 % 18 68 687
40 % 19 93 332
30 % 19 95 333
Entity #2 | Chains: B
Tryptophan Synthase Beta Chain protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 31 1331
95 % 18 63 782 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 18 63 810
70 % 18 64 833
50 % 19 85 333
40 % 19 85 352
30 % 19 86 351

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.