Sequence Similarity Clusters for the Entities in PDB 1K3T

Entity #1 | Chains: A,B,C,D
Glyceraldehyde-3-phosphate dehydrogenase protein, length: 359 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 2491
95 % 2 6 3146 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 7 2362
70 % 2 12 1105
50 % 23 139 74
40 % 23 139 95
30 % 23 139 107

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures