Sequence Similarity Clusters for the Entities in PDB 1K3D

Entity #1 | Chains: A
Phosphoenolpyruvate carboxykinase protein, length: 540 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 6105
95 % 16 20 2973 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.1
PDBFlex
90 % 16 20 3034
70 % 18 22 2661
50 % 18 24 2273
40 % 19 28 1640
30 % 19 28 1611

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6AT4 1 A, B Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
2 6AT2 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
3 6AT3 1 A, B Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
4 6ASM 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
5 6ASN 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
6 2OLR 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
7 6ASI 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
8 6D5I 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
9 6CU4 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
10 1AYL 1 A PHOSPHOENOLPYRUVATE CARBOXYKINASE ORDERED MAGNESIUM ION OBSERVED BOUND TO ATP 562 4.1.1.49 | Details
11 1OS1 1 A Phosphoenolpyruvate carboxykinase [ATP] 562 4.1.1.49 | Details
12 6CRT 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
13 1OEN 1 A PHOSPHOENOLPYRUVATE CARBOXYKINASE ONE MOLECULE EACH OF ACETATE AND ACETOACETATE APPEARS TO BE BOUND WITHIN THE ACTIVE SITE 562 4.1.1.49 | Details
14 2OLQ 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
15 1AQ2 1 A PHOSPHOENOLPYRUVATE CARBOXYKINASE ORDERED MAGNESIUM AND MANGANESE IONS OBSERVED BOUND TO ATP 562 4.1.1.49 | Details
16 1K3D 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
17 2PY7 1 X Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
18 6COM 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
19 1K3C 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
20 2PXZ 1 X Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details