Sequence Similarity Clusters for the Entities in PDB 1K3D

Entity #1 | Chains: A
Phosphoenolpyruvate carboxykinase protein, length: 540 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 5960
95 % 10 14 4884 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.1
PDBFlex
90 % 10 14 4918
70 % 12 16 4089
50 % 12 18 3142
40 % 13 22 2097
30 % 13 22 1985

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2OLR 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
2 6D5I 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
3 6CU4 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
4 1AYL 1 A PHOSPHOENOLPYRUVATE CARBOXYKINASE ORDERED MAGNESIUM ION OBSERVED BOUND TO ATP 562 4.1.1.49 | Details
5 1OS1 1 A Phosphoenolpyruvate carboxykinase [ATP] 562 4.1.1.49 | Details
6 6CRT 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
7 1OEN 1 A PHOSPHOENOLPYRUVATE CARBOXYKINASE ONE MOLECULE EACH OF ACETATE AND ACETOACETATE APPEARS TO BE BOUND WITHIN THE ACTIVE SITE 562 4.1.1.49 | Details
8 2OLQ 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
9 1AQ2 1 A PHOSPHOENOLPYRUVATE CARBOXYKINASE ORDERED MAGNESIUM AND MANGANESE IONS OBSERVED BOUND TO ATP 562 4.1.1.49 | Details
10 1K3D 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
11 2PY7 1 X Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
12 6COM 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
13 1K3C 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
14 2PXZ 1 X Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details