Sequence Similarity Clusters for the Entities in PDB 1K3D

Entity #1 | Chains: A
Phosphoenolpyruvate carboxykinase protein, length: 540 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 5871
95 % 10 14 4806 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.1
PDBFlex
90 % 10 14 4844
70 % 12 16 4029
50 % 12 18 3105
40 % 13 22 2067
30 % 13 22 1960

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2OLR 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
2 1YLH 1 A phosphoenolpyruvate carboxykinase 67854 4.1.1.49 | Details
3 6D5I 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
4 6CU4 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
5 1AYL 1 A PHOSPHOENOLPYRUVATE CARBOXYKINASE ORDERED MAGNESIUM ION OBSERVED BOUND TO ATP 562 4.1.1.49 | Details
6 1OS1 1 A Phosphoenolpyruvate carboxykinase [ATP] 562 4.1.1.49 | Details
7 1YGG 1 A phosphoenolpyruvate carboxykinase 67854 4.1.1.49 | Details
8 6CRT 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
9 1OEN 1 A PHOSPHOENOLPYRUVATE CARBOXYKINASE ONE MOLECULE EACH OF ACETATE AND ACETOACETATE APPEARS TO BE BOUND WITHIN THE ACTIVE SITE 562 4.1.1.49 | Details
10 2OLQ 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
11 1AQ2 1 A PHOSPHOENOLPYRUVATE CARBOXYKINASE ORDERED MAGNESIUM AND MANGANESE IONS OBSERVED BOUND TO ATP 562 4.1.1.49 | Details
12 1II2 1 A, B PHOSPHOENOLPYRUVATE CARBOXYKINASE 5693 4.1.1.32 | Details
13 1K3D 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
14 2PY7 1 X Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
15 1J3B 1 A, B ATP-dependent phosphoenolpyruvate carboxykinase 274 4.1.1.49 | Details
16 6COM 1 A Phosphoenolpyruvate carboxykinase (ATP) 562 4.1.1.49 | Details
17 1K3C 1 A Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
18 2PXZ 1 X Phosphoenolpyruvate carboxykinase 562 4.1.1.49 | Details
19 1XKV 1 A, B ATP-dependent phosphoenolpyruvate carboxykinase 274 4.1.1.49 | Details
20 1YTM 1 A, B phosphoenolpyruvate carboxykinase [ATP] 13335 4.1.1.49 | Details
21 1YVY 1 A, B Phosphoenolpyruvate carboxykinase [ATP] 13335 4.1.1.49 | Details
22 2PC9 1 A, B, C, D Phosphoenolpyruvate carboxykinase [ATP] 274 4.1.1.49 | Details