Sequence Similarity Clusters for the Entities in PDB 1K3D

Entity #1 | Chains: A
Phosphoenolpyruvate carboxykinase protein, length: 540 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 12 6120
95 % 16 20 2974 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.1
PDBFlex
90 % 16 20 3035
70 % 18 22 2662
50 % 18 24 2277
40 % 19 28 1643
30 % 19 28 1615

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures