Sequence Similarity Clusters for the Entities in PDB 1K33

Entity #1 | Chains: A
Transmembrane glycoprotein GP41 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 71714
95 % 4 13 3611 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.5
PDBFlex
90 % 4 13 3659
70 % 4 17 1674
50 % 4 17 1709
40 % 4 17 1711
30 % 4 17 1673

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.