Sequence Similarity Clusters for the Entities in PDB 1K2X

Entity #1 | Chains: A,C
Putative L-asparaginase protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 9462
95 % 1 4 9617 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.6
PDBFlex
90 % 1 4 9505
70 % 1 4 9079
50 % 1 4 8215
40 % 1 4 7536
30 % 1 4 6645
Entity #2 | Chains: B,D
Putative L-asparaginase protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 9625
95 % 1 4 9763 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 4 9648
70 % 1 4 9208
50 % 1 4 8332
40 % 1 4 7638
30 % 1 10 2894

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures