Sequence Similarity Clusters for the Entities in PDB 1K2F

Entity #1 | Chains: A,B
siah-1A protein protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 7834
95 % 8 10 2980 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 1.9
PDBFlex
90 % 8 10 3035
70 % 9 11 2629
50 % 9 11 2596
40 % 9 11 2543
30 % 9 11 2388

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4CA1 1 A, B E3 UBIQUITIN-PROTEIN LIGASE SIAH1 TWO ZINC FINGERS AND SUBSTRATE BINDING DOMAIN, RESIDUES 91-282 9606 2.3.2.27 | Details
2 5H9M 1 A, B E3 ubiquitin-protein ligase SIAH2 9606 6.3.2 | Details
3 4C9Z 1 A, B E3 UBIQUITIN-PROTEIN LIGASE SIAH1 TWO ZINC FINGERS AND SUBSTRATE BINDING DOMAIN, RESIDUES 91-282 9606 2.3.2.27 | Details
4 5WZZ 1 A, B, C, D E3 ubiquitin-protein ligase SIAH1 UNP residues 93-282 9606 2.3.2.27 | Details
5 4I7D 1 A, C E3 ubiquitin-protein ligase SIAH1 C-terminal domain (UNP residues 90-282) 9606 2.3.2.27 | Details
6 2A25 1 A Ubiquitin ligase SIAH1 Substrate binding domain (residues 90-282) 9606 2.3.2.27 | Details
7 4X3G 1 A, B E3 ubiquitin-protein ligase SIAH1 SINA DOMAIN, RESIDUES 91-282 9606 2.3.2.27 | Details
8 4I7C 1 A, C E3 ubiquitin-protein ligase SIAH1 C-terminal domain (UNP residues 90-282) 9606 2.3.2.27 | Details
9 1K2F 1 A, B siah-1A protein C-terminal domain (residues 93-282) 10090 2.3.2.27 | Details
10 4I7B 1 A, C E3 ubiquitin-protein ligase SIAH1 C-terminal domain (UNP residues 90-282) 9606 2.3.2.27 | Details
11 2AN6 1 A, B, C, D Ubiquitin ligase SIAH1A residues 92-282 10090 2.3.2.27 | Details