Sequence Similarity Clusters for the Entities in PDB 1K2C

Entity #1 | Chains: A,B
PROTEASE RETROPEPSIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46719
95 % 510 577 2 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 552 639 2
70 % 575 666 5
50 % 589 692 5
40 % 599 702 9
30 % 601 704 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.