Sequence Similarity Clusters for the Entities in PDB 1K2B

Entity #1 | Chains: A,B
PROTEASE RETROPEPSIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48690
95 % 273 590 2 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 293 652 3
70 % 307 679 5
50 % 312 705 5
40 % 314 715 9
30 % 316 717 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures