Sequence Similarity Clusters for the Entities in PDB 1K28

Entity #1 | Chains: A
TAIL-ASSOCIATED LYSOZYME protein, length: 584 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 9154
95 % 2 5 6784
90 % 2 5 6768
70 % 2 5 6591
50 % 2 5 6110
40 % 2 5 5720
30 % 2 5 5124
Entity #2 | Chains: D
BASEPLATE STRUCTURAL PROTEIN GP27 protein, length: 391 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 6317
95 % 2 5 6859
90 % 2 5 6841
70 % 2 5 6662
50 % 2 5 6176
40 % 2 5 5772
30 % 2 5 5174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.