Sequence Similarity Clusters for the Entities in PDB 1K28

Entity #1 | Chains: A
TAIL-ASSOCIATED LYSOZYME protein, length: 584 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 8635
95 % 2 5 6440
90 % 2 5 6418
70 % 2 5 6253
50 % 2 5 5810
40 % 2 5 5446
30 % 2 5 4891
Entity #2 | Chains: D
BASEPLATE STRUCTURAL PROTEIN GP27 protein, length: 391 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 5942
95 % 2 5 6512
90 % 2 5 6489
70 % 2 5 6325
50 % 2 5 5876
40 % 2 5 5501
30 % 2 5 4945

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.