Sequence Similarity Clusters for the Entities in PDB 1K25

Entity #1 | Chains: A,B,C,D
low-affinity PENICILLIN-BINDING PROTEIN 2X protein, length: 685 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 16316
95 % 1 1 15179
90 % 1 1 14891
70 % 5 6 6313
50 % 6 7 5571
40 % 6 7 5230
30 % 6 7 4698

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.