Sequence Similarity Clusters for the Entities in PDB 1K22

Entity #1 | Chains: L
Prothrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 166 334 51
95 % 168 342 63 Flexibility: Low
Max RMSD: 5.3, Avg RMSD: 0.7
PDBFlex
90 % 168 342 67
70 % 168 342 79
50 % 168 342 111
40 % 168 342 134
30 % 168 342 147
Entity #2 | Chains: H
Prothrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 163 332 53
95 % 184 378 52
90 % 185 385 52
70 % 185 409 47
50 % 185 409 85
40 % 1087 1873 4
30 % 1093 1887 7
Entity #3 | Chains: I
Hirudin variant-2 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures