Sequence Similarity Clusters for the Entities in PDB 1K21

Entity #1 | Chains: L
Prothrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 164 335 45
95 % 164 336 60
90 % 164 336 65
70 % 164 338 76
50 % 164 338 101
40 % 164 338 125
30 % 164 338 137
Entity #2 | Chains: H
Prothrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 143 290 55
95 % 179 374 35
90 % 180 381 38
70 % 180 405 44
50 % 180 405 78
40 % 989 1684 4
30 % 1060 1833 6
Entity #3 | Chains: I
Hirudin variant-2 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.