Sequence Similarity Clusters for the Entities in PDB 1K1K

Entity #1 | Chains: A
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 80 208 26
95 % 92 239 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 93 240 35
70 % 113 321 18
50 % 274 730 5
40 % 278 735 9
30 % 652 1175 8
Entity #2 | Chains: B
HEMOGLOBIN BETA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 6449
95 % 99 239 33 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 102 244 31
70 % 126 335 14
50 % 275 730 5
40 % 279 735 9
30 % 653 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.