Sequence Similarity Clusters for the Entities in PDB 1K1K

Entity #1 | Chains: A
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 80 208 26
95 % 92 239 34
90 % 93 240 35
70 % 114 321 17
50 % 276 730 4
40 % 280 735 8
30 % 654 1175 8
Entity #2 | Chains: B
HEMOGLOBIN BETA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 6313
95 % 99 239 33
90 % 102 244 31
70 % 127 335 14
50 % 277 730 4
40 % 281 735 8
30 % 655 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.