Sequence Similarity Clusters for the Entities in PDB 1K1K

Entity #1 | Chains: A
HEMOGLOBIN ALPHA CHAIN protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 78 205 24
95 % 90 236 31
90 % 91 237 32
70 % 112 317 17
50 % 270 718 4
40 % 274 723 8
30 % 647 1162 8
Entity #2 | Chains: B
HEMOGLOBIN BETA CHAIN protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 6130
95 % 97 236 30
90 % 100 241 28
70 % 125 331 11
50 % 271 718 4
40 % 275 723 8
30 % 648 1162 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.