Sequence Similarity Clusters for the Entities in PDB 1K1G

Entity #1 | Chains: B
5'-R(*UP*AP*UP*AP*CP*UP*AP*AP*CP*AP*A)-3' rna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
SF1-Bo isoform protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61256
95 % 1 1 42202
90 % 1 1 40146
70 % 1 1 35456
50 % 1 1 30321
40 % 6 6 5556
30 % 6 6 4979

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.