Sequence Similarity Clusters for the Entities in PDB 1K1G

Entity #1 | Chains: B
5'-R(*UP*AP*UP*AP*CP*UP*AP*AP*CP*AP*A)-3' rna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
SF1-Bo isoform protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68525
95 % 1 1 47202
90 % 1 1 44706
70 % 1 1 39200
50 % 1 1 33344
40 % 6 6 6236
30 % 6 6 5590

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures