Sequence Similarity Clusters for the Entities in PDB 1K1G

Entity #1 | Chains: B
5'-R(*UP*AP*UP*AP*CP*UP*AP*AP*CP*AP*A)-3' rna, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
SF1-Bo isoform protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67659
95 % 1 1 46641
90 % 1 1 44194
70 % 1 1 38766
50 % 1 1 32982
40 % 6 6 6145
30 % 6 6 5501

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures