Sequence Similarity Clusters for the Entities in PDB 1K1E

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
deoxy-D-mannose-octulosonate 8-phosphate phosphatase protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 3502
95 % 1 3 3849 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 3921
70 % 1 3 3839
50 % 1 3 3736
40 % 1 3 3554
30 % 1 3 3256

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures