Sequence Similarity Clusters for the Entities in PDB 1K1E

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
deoxy-D-mannose-octulosonate 8-phosphate phosphatase protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 3158
95 % 1 3 3917 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 3976
70 % 1 3 3917
50 % 1 3 3808
40 % 1 3 3660
30 % 1 3 3423

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures