Sequence Similarity Clusters for the Entities in PDB 1K1E

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
deoxy-D-mannose-octulosonate 8-phosphate phosphatase protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 3091
95 % 1 3 3830 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 3879
70 % 1 3 3820
50 % 1 3 3715
40 % 1 3 3578
30 % 1 3 3349

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures