Sequence Similarity Clusters for the Entities in PDB 1K1E

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
deoxy-D-mannose-octulosonate 8-phosphate phosphatase protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 2996
95 % 1 3 3738 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 3 3785
70 % 1 3 3738
50 % 1 3 3645
40 % 1 3 3516
30 % 1 3 3284

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.