Sequence Similarity Clusters for the Entities in PDB 1K1D

Entity #1 | Chains: A,B,C,D,E,F,G,H
D-hydantoinase protein, length: 460 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 8060
95 % 1 1 8503 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 8442
70 % 5 5 3963
50 % 6 6 3034
40 % 38 38 593
30 % 52 52 434

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures