Sequence Similarity Clusters for the Entities in PDB 1K0Y

Entity #1 | Chains: A,C
hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 208 26
95 % 51 239 34 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 0.7
PDBFlex
90 % 52 240 35
70 % 63 321 18
50 % 153 730 5
40 % 154 735 9
30 % 433 1175 8
Entity #2 | Chains: B,D
hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 158 53
95 % 51 239 33
90 % 52 244 31
70 % 66 335 14
50 % 154 730 5
40 % 155 735 9
30 % 434 1175 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.