Sequence Similarity Clusters for the Entities in PDB 1K09

Entity #1 | Chains: A
Core Module I protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62190
95 % 1 1 50590
90 % 1 2 34072
70 % 1 2 30343
50 % 1 2 25861
40 % 1 2 22710
30 % 1 2 18925
Entity #2 | Chains: B
Core Module II protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62189
95 % 1 1 50589
90 % 2 2 34072
70 % 2 2 30343
50 % 2 2 25861
40 % 2 2 22710
30 % 2 2 18925

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures