Sequence Similarity Clusters for the Entities in PDB 1K09

Entity #1 | Chains: A
Core Module I protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75690
95 % 1 1 52802
90 % 1 2 35782
70 % 1 2 31823
50 % 1 2 27242
40 % 1 2 24093
30 % 1 2 20520
Entity #2 | Chains: B
Core Module II protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75691
95 % 1 1 52803
90 % 2 2 35782
70 % 2 2 31823
50 % 2 2 27242
40 % 2 2 24093
30 % 2 2 20520

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures