Sequence Similarity Clusters for the Entities in PDB 1JZZ

Entity #1 | Chains: A
23S rRNA rna, length: 2880 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: K
Ribosomal Protein L4 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 29 1148
95 % 14 29 1564
90 % 14 29 1598
70 % 14 29 1638
50 % 139 182 124
40 % 139 182 142
30 % 175 322 87
Entity #3 | Chains: L
Ribosomal Protein L22 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 28 1221
95 % 14 30 1535
90 % 14 30 1569
70 % 14 30 1600
50 % 14 30 1643
40 % 14 30 1658
30 % 14 30 1617
Entity #4 | Chains: M
Ribosomal Protein L32 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 34 982
95 % 14 34 1356
90 % 14 34 1374
70 % 14 34 1394
50 % 134 181 128
40 % 169 318 86
30 % 169 318 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.