Sequence Similarity Clusters for the Entities in PDB 1JZX

Entity #1 | Chains: A
23S rRNA rna, length: 2880 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: K
Ribosomal Protein L4 protein, length: 205 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 29 1141
95 % 10 29 1562
90 % 10 29 1595
70 % 10 29 1635
50 % 133 182 124
40 % 133 182 142
30 % 168 321 85
Entity #3 | Chains: L
Ribosomal Protein L22 protein, length: 134 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 28 1213
95 % 10 30 1531
90 % 10 30 1564
70 % 10 30 1595
50 % 10 30 1635
40 % 10 30 1651
30 % 10 30 1612
Entity #4 | Chains: M
Ribosomal Protein L32 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 34 981
95 % 10 34 1353
90 % 10 34 1370
70 % 10 34 1393
50 % 128 181 128
40 % 162 317 86
30 % 162 317 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.