Sequence Similarity Clusters for the Entities in PDB 1JYV

Entity #1 | Chains: A,B,C,D
Beta-Galactosidase protein, length: 1023 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 3093
95 % 13 59 109 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 13 59 113
70 % 13 59 127
50 % 13 59 154
40 % 13 59 172
30 % 13 62 179

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.