Sequence Similarity Clusters for the Entities in PDB 1JYR

Entity #1 | Chains: A
GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 37 518
95 % 3 38 522 Flexibility: Medium
Max RMSD: 13.5, Avg RMSD: 6.3
PDBFlex
90 % 3 38 556
70 % 3 38 595
50 % 4 42 546
40 % 15 134 226
30 % 23 231 151
Entity #2 | Chains: L
peptide: PSpYVNVQN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.