Sequence Similarity Clusters for the Entities in PDB 1JYR

Entity #1 | Chains: A
GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 37 654
95 % 3 38 602 Flexibility: Medium
Max RMSD: 13.5, Avg RMSD: 6.3
PDBFlex
90 % 3 38 640
70 % 3 38 685
50 % 4 42 618
40 % 18 159 238
30 % 25 239 171
Entity #2 | Chains: L
peptide: PSpYVNVQN protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures