Sequence Similarity Clusters for the Entities in PDB 1JYQ

Entity #1 | Chains: A,B
GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 37 606
95 % 17 38 559 Flexibility: Medium
Max RMSD: 13.5, Avg RMSD: 6.3
PDBFlex
90 % 17 38 588
70 % 17 38 629
50 % 20 42 572
40 % 70 159 216
30 % 90 239 159
Entity #2 | Chains: H,L
mAZ-pY-(alpha Me)pY-N-NH2 peptide inhibitor protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures