Sequence Similarity Clusters for the Entities in PDB 1JYQ

Entity #1 | Chains: A,B
GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 37 529
95 % 17 38 540 Flexibility: Medium
Max RMSD: 13.5, Avg RMSD: 6.3
PDBFlex
90 % 17 38 568
70 % 17 38 599
50 % 20 42 554
40 % 64 134 232
30 % 86 231 152
Entity #2 | Chains: H,L
mAZ-pY-(alpha Me)pY-N-NH2 peptide inhibitor protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures