Sequence Similarity Clusters for the Entities in PDB 1JYI

Entity #1 | Chains: A,B,C,D
Concanavalin A protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 47 57 175
95 % 70 84 141
90 % 71 88 147
70 % 91 110 138
50 % 91 110 165
40 % 91 110 182
30 % 91 110 195
Entity #2 | Chains: P,Q,R,S
12-mer peptide protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.