Sequence Similarity Clusters for the Entities in PDB 1JYA

Entity #1 | Chains: A,B
YOPE regulator protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 5304
95 % 1 4 4177 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.0
PDBFlex
90 % 1 4 4206
70 % 1 4 4143
50 % 1 4 3992
40 % 1 5 3372
30 % 1 5 3150

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.