Sequence Similarity Clusters for the Entities in PDB 1JYA

Entity #1 | Chains: A,B
YOPE regulator protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 5205
95 % 1 4 4031 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 1.1
PDBFlex
90 % 1 4 4082
70 % 1 4 4011
50 % 1 4 3906
40 % 1 5 3373
30 % 1 5 3112

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures