Sequence Similarity Clusters for the Entities in PDB 1JY8

Entity #1 | Chains: A
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 17 916
95 % 6 20 985 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 6 20 1010
70 % 8 27 668
50 % 31 50 294
40 % 37 56 260
30 % 40 59 263

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.