Sequence Similarity Clusters for the Entities in PDB 1JY8

Entity #1 | Chains: A
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 17 951
95 % 6 20 1010 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 6 20 1040
70 % 8 27 699
50 % 33 52 296
40 % 39 58 259
30 % 42 61 265

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.