Sequence Similarity Clusters for the Entities in PDB 1JY3

Entity #1 | Chains: N,Q
FIBRINOGEN ALPHA CHAIN protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22703
95 % 2 2 19386
90 % 2 2 18864
70 % 2 2 17411
50 % 2 2 15213
40 % 2 2 13587
30 % 2 2 11644
Entity #2 | Chains: O,R
FIBRINOGEN BETA CHAIN protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22678
95 % 2 2 19363
90 % 2 2 18843
70 % 2 2 17393
50 % 2 2 15196
40 % 2 2 13570
30 % 2 2 11627
Entity #3 | Chains: P,S
FIBRINOGEN GAMMA-B CHAIN protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22738
95 % 2 2 19416
90 % 2 2 18894
70 % 2 3 11575
50 % 2 3 10375
40 % 2 3 9412
30 % 2 3 8214

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.