Sequence Similarity Clusters for the Entities in PDB 1JY3

Entity #1 | Chains: N,Q
FIBRINOGEN ALPHA CHAIN protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24227
95 % 2 2 20689
90 % 2 2 20111
70 % 2 2 18469
50 % 2 2 16058
40 % 2 2 14327
30 % 2 2 12259
Entity #2 | Chains: O,R
FIBRINOGEN BETA CHAIN protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24200
95 % 2 2 20663
90 % 2 2 20086
70 % 2 2 18448
50 % 2 2 16039
40 % 2 2 14311
30 % 2 2 12243
Entity #3 | Chains: P,S
FIBRINOGEN GAMMA-B CHAIN protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24263
95 % 2 2 20720
90 % 2 2 20142
70 % 2 3 12356
50 % 2 3 11030
40 % 2 3 10014
30 % 2 3 8728

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.