Sequence Similarity Clusters for the Entities in PDB 1JY2

Entity #1 | Chains: N,Q
FIBRINOGEN ALPHA CHAIN protein, length: 53 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23044
95 % 1 2 19657
90 % 1 2 19127
70 % 1 2 17651
50 % 1 2 15404
40 % 1 2 13753
30 % 1 2 11789
Entity #2 | Chains: O,R
FIBRINOGEN BETA CHAIN protein, length: 56 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23018
95 % 1 2 19632
90 % 1 2 19104
70 % 1 2 17631
50 % 1 2 15385
40 % 1 2 13736
30 % 1 2 11772
Entity #3 | Chains: P,S
FIBRINOGEN GAMMA-B CHAIN protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23078
95 % 1 2 19686
90 % 1 2 19157
70 % 1 3 11715
50 % 1 3 10504
40 % 1 3 9531
30 % 1 3 8318

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.