Sequence Similarity Clusters for the Entities in PDB 1JXV

Entity #1 | Chains: A,B,C,D,E,F
Nucleoside Diphosphate Kinase A protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 3127
95 % 2 6 2761 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 0.8
PDBFlex
90 % 7 14 805
70 % 16 34 342
50 % 65 129 59
40 % 78 157 35
30 % 78 158 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures