Sequence Similarity Clusters for the Entities in PDB 1JXQ

Entity #1 | Chains: A,B,C,D
Caspase-9 protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4243
95 % 2 4 3692 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.1
PDBFlex
90 % 2 4 3742
70 % 2 4 3696
50 % 2 4 3596
40 % 2 4 3473
30 % 97 112 218
Entity #2 | Chains: E,F
benzoxycarbonyl-Val-Ala-Asp-fluoromethyl ketone Inhibitor protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.