Sequence Similarity Clusters for the Entities in PDB 1JXQ

Entity #1 | Chains: A,B,C,D
Caspase-9 protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4153
95 % 2 4 3640 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.0
PDBFlex
90 % 2 4 3693
70 % 2 4 3631
50 % 2 4 3540
40 % 2 4 3421
30 % 96 111 216
Entity #2 | Chains: E,F
benzoxycarbonyl-Val-Ala-Asp-fluoromethyl ketone Inhibitor protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.