Sequence Similarity Clusters for the Entities in PDB 1JXQ

Entity #1 | Chains: A,B,C,D
Caspase-9 protein, length: 284 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 3987
95 % 2 4 3519
90 % 2 4 3565
70 % 2 4 3513
50 % 2 4 3423
40 % 2 4 3313
30 % 96 111 211
Entity #2 | Chains: E,F
benzoxycarbonyl-Val-Ala-Asp-fluoromethyl ketone Inhibitor protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.